PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn355681
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 338aa    MW: 37331.8 Da    PI: 5.9223
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn355681genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.3e-06891211955
                 HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  Achn355681  89 RFQMLRDLIPHS----DQKRDTASFLLEVIEYVQYLQ 121
                 699********9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.5E-1743129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.79444120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.30E-946124No hitNo description
SuperFamilySSF474591.27E-789131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MKPTKFHHEK EEDEETPPSN NKELCFINWD LIVEADGKND KASATRSKHS VTEQRRRSKI  60
NERTPVQDTE VVVFRGISWD ASGHVHLIRF QMLRDLIPHS DQKRDTASFL LEVIEYVQYL  120
QEKRNSHWQV QNFVGHPQAI KNGSGPGSTF PGRFDENNIT VSPTIHPNQQ NPIESDSSGD  180
PSGKMVDQLP ELVDKPIAMP MALQATVPAP IQGDAVLPHP LQRPISDAQS TECPIMSDSL  240
NQQEDLMIEG GTISVTSVYS QGLLNNLTQA LQSAGVDLSQ ATISVQIDLG KRANRGLTSG  300
IPVAKDPENT VPHQPIAHFR DVSNGDNVGQ VQKRLKI*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015866969.11e-127PREDICTED: transcription factor BIM2-like
RefseqXP_015895230.11e-127PREDICTED: transcription factor BIM2
SwissprotQ9CAA45e-82BIM2_ARATH; Transcription factor BIM2
TrEMBLD7TA751e-122D7TA75_VITVI; Putative uncharacterized protein
STRINGVIT_01s0010g00540.t011e-122(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44262337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-83BES1-interacting Myc-like protein 2